High-Fiber Wild Blueberry Flax Muffins (gluten-free, dairy-free)

Flaxseeds are a nutrient-rich superfood packed with fiber that nourishes beneficial gut bacteria, supports digestion, lowers inflammation, promotes heart health, and helps balance blood sugar levels. This healthy muffin recipe uses 1 ½ cups of flaxseed meal, along with a touch of oat flour and a handful of wild blueberries for an extra boost of antioxidants and nourishment. The soluble fiber found in plant-based foods is essential for maintaining overall well-being.
Dietary fiber plays a crucial role in reducing inflammation, but not in the way we might expect. Since fiber cannot be broken down by the digestive enzymes in our gut, it becomes fuel for the beneficial microbes residing in the colon. These friendly microbes ferment soluble fiber, producing short-chain fatty acids (SCFAs)—key compounds that support gut health and immune function.
SCFAs help nourish and strengthen the gut lining, creating a protective barrier that prevents harmful microbes from crossing into the bloodstream and triggering an inflammatory immune response. Additionally, SCFAs enter the bloodstream, where they interact with immune cells at the genetic level, reducing the production of pro-inflammatory cytokines—immune molecules responsible for pain, inflammation, and tissue damage. This process highlights just one of the many ways that fiber-rich foods help combat systemic inflammation and promote overall health.
Another key function of soluble fiber is binding to bile in the intestines, preventing its reabsorption. Since bile contains cholesterol, this process helps naturally and gently lower blood cholesterol levels. Additionally, soluble fiber forms a gel-like substance when mixed with water in the gut, slowing the absorption of glucose (sugar) into the bloodstream. This gradual absorption ensures that carbohydrates from food are released into the blood at a steady pace, keeping blood sugar levels balanced. Without fiber, glucose enters the bloodstream too quickly, causing blood sugar spikes that can trigger an immune response and contribute to inflammation.
To harness the benefits of fiber, focus on incorporating a diverse range of plant foods into your diet. Flaxseeds and oats are excellent sources of soluble fiber, but so are whole grains, legumes, seeds, nuts, fruits, and vegetables. Fiber supplements, like psyllium, can also support digestion and gut health. By regularly consuming fiber-rich foods, you can nourish beneficial gut microbes, reduce inflammation, and regulate blood sugar—all essential steps toward long-term health and resilience. Best of all, these foods can be both healing and delicious! Try them in comforting, nutrient-dense recipes, like this healthy gluten-free muffin.
If you're looking for even more high-fiber meal ideas, consider joining our Nourishing Meals® membership platform, where you'll gain access to over 1,800 recipes tailored to every diet, plus meal planning tools, shopping lists, and more! Learn more here.

About the Author
Alissa Segersten, MS, CN
Alissa Segersten, MS, CN, is the founder of Nourishing Meals®, an online meal-planning membership with over 1,800 nourishing recipes and tools to support dietary change and better health. As a functional nutritionist, professional recipe developer, and author of The Whole Life Nutrition Cookbook, Nourishing Meals, and co-author of The Elimination Diet, she helps people overcome health challenges through food. A mother of five, Alissa understands the importance of creating nutrient-dense meals for the whole family. Rooted in science and deep nourishment, her work makes healthy eating accessible, empowering thousands to transform their well-being through food.Nourishing Meals Newsletter
Email updates.
Add Comment
Comments
Why don't you publish nutritional content for your recipes? This seems very important. How much protein, fiber, calories, calcium, fat, etc?
I would like an answer to this, too. I thought this would be a no-brainer for a nutritionist to include.
Hi Lee and Valerie,
Thank you for the feedback. We are in the process now of a major site update that will include full nutrition data for all recipes along with more features associated with this for our membership community. Thank you for your patience as we continue to improve the site for all visitors and members. :)
I’m making these today for my son who has type 1 diabetes. By any chance do you know how many carbs are in this recipe? Thank you so much 🙏🏻
These make me so happy. In a world of red meat and paleo... Colon cáncer is on the rise. It's can take someone by surprise ... I'm so grateful you have these yummy high fiber muffins as an option.
Hi! I baked your recipe and it’s delicious. Thank you! My daughter need more fibers intake so it’s perfect. I was wondering if you had the nutritional info (protein, fibers etc.) thank you very much!
Can you use a flax egg in place of eggs or will it loose its effectiveness due to the already high flax content?
Hi there,
No, you would not want to add flax eggs to replace the eggs in this recipe. Instead, use extra applesauce and water. Each egg equals about 1/4 cup of liquid.
I also have an egg-free and oat-free version of this recipe in the member portal: https://nourishingmeals.com/recipes/banana-flax-muffins
Happy baking! 😊
These are one of my favorites! so good!
I can't eat flax seeds. What can I substitute? Thanks!
How many grams of fiber are in these, given they are called "high fiber muffins"? Thanks! :)
I made these last night and they are really good! Not as sweet as I’m used to, but I have a terrible sweet tooth. Great recipe, thank you!! Do you happen to have the nutritional information?
I made these tonight and they are really good! Not as sweet as I was expecting, but I have a serious sweet tooth, lol. Do you have the nutrition information for these muffins? Thanks!!
Is there an alternative to avocado oil? thank you!
What can I use instead of applesauce?
Hi Deborah,
You can used mashed ripe banana in place of the applesauce. :)
excellent - will try!
I can't eat oats. What could I use as a substitute?
Hi Lynda,
Freshly ground buckwheat flour should work, though I have not tested the recipe this way. Please report back on your results! :)
Is there a good alternative to oat flour for this recipie? Would coconut flour or buckwheat flour work?
Margaret,
I think raw buckwheat flour may work. Let us know how they turn out.
Making these today. I do ‘t have apple sauce but I do have apples. So I guess i’ll bust out some home made apple sause really fast. 😄. These muffins + Coffee??? :-D
Jennifer,
Mashed bananas work in place of the applesauce. There is a review about this if you click through to the recipe in the membership section. Enjoy!
Great recipe, but please don’t use store bought flax meal. It starts breaking down as soon as it is ground and loses nutrients. Keep flax seed in freezer and grind right before using.💞
Great suggestion so many people do not realize this and buy the flax meal. It’s already rancid ❤️
This does look delicious. I'm not sure abut heating flax though as it become rancid and therefore pro-inflammatory very very easy.
Sounds great! Our family is gluten free and tree nut free and this recipe will work for us :-). Looking forward to trying it!
Tamara